All Issue

2024 Vol.46, Issue 3

Article

30 September 2024. pp. 131-142
Abstract
References
1

김종규 (2022) 우리나라에서 기후 변화에 따른 어업 생산량의 변동. 한국재난정보학회논문집 18(1):194-201

2

Alam MJ, Kim N-K, Andriyono S, Choi H-k, Lee J-H, Kim H-W (2020) Assessment of fish biodiversity in four Korean rivers using environmental DNA metabarcoding. Peer J 8:e9508

10.7717/peerj.9508
3

Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25(17):3389-3402

10.1093/nar/25.17.3389
4

Baldwin CC, Mounts JH, Smith DG, Weigt LA (2009) Genetic identification and color descriptions of early life-history stages of Belizean Phaeoptyx and Astrapogon (Teleostei: Apogonidae) with comments on identification of adult Phaeoptyx. Zootaxa 2008:1-22

10.11646/zootaxa.2008.1.1
5

Bessey C, Jarman SN, Berry O, Olsen YS, Bunce M, Simpson T, Power M, McLaughlin J, Edgar GJ, Keesing J (2020) Maximizing fish detection with eDNA metabarcoding. Environ DNA 2(4):493-504

10.1002/edn3.74
6

Bingpeng X, Heshan L, Zhilan Z, Chunguang W, Yanguo W, Jianjun W (2018) DNA barcoding for identification of fish species in the Taiwan Strait. PloS One 13(6):e0198109

10.1371/journal.pone.0198109
7

Briones-Fourzan P, Hendrickx ME (2022) Ecology and diversity of marine decapod crustaceans. Diversity 14:614

10.3390/d14080614
8

Chen Y, Shan X, Jin X, Johannessen A, Yang T, Dai F (2018) Changes in fish diversity and community structure in the central and southern Yellow Sea from 2003 to 2015. J Oceanol Limnol 36:805-817

10.1007/s00343-018-6287-6
9

Colmenares GMG, Montes AJG, Harms-Tuohy CA, Schizas NV (2023) Using eDNA sampling for species-specific fish detection in tropical oceanic samples: limitations and recommendations for future use. Peer J 11:e14810

10.7717/peerj.14810
10

Costello MJ, Basher Z, McLeod L, Asaad I, Claus S, Vandepitte L, Yasuhara M, Gislason H, Edwards M, Appeltans W (2017) Methods for the study of marine biodiversity. In: Walters M, Scholes RJ (ed) The GEO handbook on biodiversity observation networks, Springer Nature, Heidelberg, pp. 129-163

10.1007/978-3-319-27288-7_6
11

Farrag MM, El-Naggar HA, Abou-Mahmoud MM, Alabssawy AN, Ahmed HO, Abo-Taleb HA, Kostas K (2019) Marine biodiversity patterns off Alexandria area, southeastern Mediterranean Sea, Egypt. Environ Monit Assess 191:1-28

10.1007/s10661-019-7471-7
12

Ficetola GF, Miaud C, Pompanon F, Taberlet P (2008) Species detection using environmental DNA from water samples. Biology Lett 4(4):423-425

10.1098/rsbl.2008.0118
13

Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3:294-299

14

Geller J, Meyer C, Parker M, Hawk H (2013) Redesign of PCR primers for mitochondrial cytochrome c oxidase subunit I for marine invertebrates and application in all-taxa biotic surveys. Mol Ecol Resour 13(5):851-861

10.1111/1755-0998.12138
15

Gomes LC, Pessali TC, Sales NG, Pompeu PS, Carvalho DC (2015) Integrative taxonomy detects cryptic and overlooked fish species in a neotropical river basin. Genetica 143:581-588

10.1007/s10709-015-9856-z
16

Jo H, Kim D-K, Park K, Kwak I-S (2019) Discrimination of spatial distribution of aquatic organisms in a coastal ecosystem using eDNA. Appl Sci 9(17):3450

10.3390/app9173450
17

Karim A, Saif R, Ali FS, Gil Z, Ali W (2018) Use of CO1 gene sequences for computing genetic diversity between Cirrhinus mrigala from two different habitats (Farm and River). J Fish and Life Sci 3:54-57

18

Kim E-B, Lee SR, Lee CI, Park H, Kim H-W (2019) Development of the cephalopod-specific universal primer set and its application for the metabarcoding analysis of planktonic cephalopods in Korean waters. Peer J 7:e7140

10.7717/peerj.7140
19

Kim E-B, Sagong H, Lee J-H, Kim G, Kwon D-H, Kim Y, Kim H-W (2022) Environmental DNA metabarcoding analysis of fish assemblages and phytoplankton communities in a furrowed seabed area caused by aggregate mining. Front Mar Sci 9:788380

10.3389/fmars.2022.788380
20

Komai T, Gotoh RO, Sado T, Miya M (2019) Development of a new set of PCR primers for eDNA metabarcoding decapod crustaceans. Metabarcoding Metagenom 3:e33835

10.3897/mbmg.3.33835
21

Kumar G, Reaume AM, Farrell E, Gaither MR (2022) Comparing eDNA metabarcoding primers for assessing fish communities in a biodiverse estuary. PloS One 17(6): e0266720

10.1371/journal.pone.0266720
22

Lee J, Jeon D (2005) Climate change and its impact on marine ecosystem. Nat Conserv 132:1-8

23

Li P, Li D, Hong Y, Chen M, Zhang X, Hu L, Liu C (2022) Combining DNA mini-barcoding and species-specific primers PCR technology for identification of heosemys grandis. Front Ecol Evol 10:822871

10.3389/fevo.2022.822871
24

Miya M, Sato Y, Fukunaga T, Sado T, Poulsen J, Sato K, Minamoto T, Yamamoto S, Yamanaka H, Araki H (2015) MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species. R Soc Open Sci 2(7):150088

10.1098/rsos.150088
25

Mychek-Londer JG, Balasingham KD, Heath DD (2020) Using environmental DNA metabarcoding to map invasive and native invertebrates in two Great Lakes tributaries. Environ DNA 2(3):283-297

10.1002/edn3.56
26

Nakabo T (2013) Fishes of Japan with pictorial keys to the species I, II and III. Tokai University Press, Hadano, 1749 p

27

Narváez-Barandica JC, Quintero-Galvis JF, Aguirre-Pabón JC, Castro LR, Betancur R, Acero Pizarro A (2023) A comparative phylogeography of three marine species with different PLD Modes reveals two genetic breaks across the Southern Caribbean Sea. Animals 13(15):2528

10.3390/ani13152528
28

Persis M, Chandra Sekhar Reddy A, Rao L, Khedkar G, Ravinder K, Nasruddin K (2009) COI (cytochrome oxidase-I) sequence based studies of Carangid fishes from Kakinada coast, India. Mol Biol Rep 36:1733-1740

10.1007/s11033-008-9375-4
29

Rennstam Rubbmark O, Sint D, Horngacher N, Traugott M (2018) A broadly applicable COI primer pair and an efficient single-tube amplicon library preparation protocol for metabarcoding. Ecol Evol 8(24):12335-12350

10.1002/ece3.4520
30

Rourke ML, Fowler AM, Hughes JM, Broadhurst MK, DiBattista JD, Fielder S, Wilkes Walburn J, Furlan EM (2022) Environmental DNA (eDNA) as a tool for assessing fish biomass: a review of approaches and future considerations for resource surveys. Environ DNA 4(1):9-33

10.1002/edn3.185
31

Schulte NO, Craine JM, Leopold DR, Devitt JK, Fierer N (2024) Diversity of freshwater algal assemblages across the United States as revealed by DNA metabarcoding. Environ DNA 6(1):e477

10.1002/edn3.477
32

Stat M, Huggett MJ, Bernasconi R, DiBattista JD, Berry TE, Newman SJ, Harvey ES, Bunce M (2017) Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment. Sci Rep 7(1):12240

10.1038/s41598-017-12501-5
33

Taberlet P, Bonin A, Zinger L, Coissac E. (2018). Environmental DNA: For biodiversity research and monitoring. Oxford University Press, Oxford, 253 p

10.1093/oso/9780198767220.001.0001
34

Truong NT, Phan GH, Lam TT, Nguyen TH, Khang DT, Tran MT, Tran NS, Dinh QM (2022) The mismatch between morphological and molecular attribution of three Glossogobius species in the Mekong Delta. BMC Zool 7(1):34

10.1186/s40850-022-00137-6
35

Villamor A, Costantini F, Abbiati M (2014) Genetic structuring across marine biogeographic boundaries in rocky shore invertebrates. PloS One 9(7):e101135

10.1371/journal.pone.0101135
36

Ward RD, Zemlak TS, Innes BH, Last PR, Hebert PD (2005) DNA barcoding Australia's fish species. Philos Trans R Soc Lond B Biol Sci 360(1462):1847-1857

10.1098/rstb.2005.1716
37

Zhang S, Zhao J, Yao M (2020) A comprehensive and comparative evaluation of primers for metabarcoding eDNA from fish. Methods Ecol Evol 11(12):1609-1625

10.1111/2041-210X.13485

국문 참고자료의 영문표기 English translation / Romanization of references originally written in Korean

1

Kim J.-G. (2022) Variations in catches of fisheries according to the climate change of Korea. J Kor Soc Disaster Inform 18:194-201

Information
  • Publisher :Korea Institute of Ocean Science and Technology
  • Publisher(Ko) :한국해양과학기술원
  • Journal Title :Ocean and Polar Research
  • Journal Title(Ko) :Ocean and Polar Research
  • Volume : 46
  • No :3
  • Pages :131-142
  • Received Date : 2024-07-22
  • Revised Date : 2024-09-10
  • Accepted Date : 2024-09-10